Job Description O43719 Confidence 99.61% Date Wed May 9 18:03:47 BST 2012 Rank 108 Aligned Residues 80 % Identity 18% Template d2cpya1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.																																.
Template Conservation																																		.	.	.	.	.	.	.																																.
Template Sequence		S	A	K	V	C	A	H	I	T	N	I	P	F	S	I	T	K	M	D	V	L	Q	F	L	E	G	I	P	V	D	E	N	.	.	.	.	.	.	.	A	V	H	V	L	V	D	N	N	G	Q	G	L	G	Q	A	L	V	Q	F	K	N	E	D	D	A	R	K	S	E	R	.	L	H	R	K	K	L	N	G	R
Template Known Secondary structure		S									S			T	T	S									T	T	T	S				S	T	.	.	.	.	.	.	.	T							T	T	S	S		S	S							S	S								G	G	.	G		S				T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																																.
Template SS confidence
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.								.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.	.
		210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	F	V	H	V	V	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		613	.	.	.	.	.	.	620

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions