Job Description O43719 Confidence 99.59% Date Wed May 9 18:03:47 BST 2012 Rank 119 Aligned Residues 75 % Identity 21% Template d2cpia1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																					.	.	.																											.	.	.	.
Query SS confidence																					.	.	.																											.	.	.	.
Query Sequence		R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	.	.	.	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	.	.	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E
Query Conservation																					.	.	.																											.	.	.	.
Alig confidence																					.	.	.													.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		Q	K	N	L	V	F	V	V	G	L	S	Q	R	L	A	D	P	E	V	L	K	R	P	E	Y	F	G	K	F	G	K	I	H	K	.	.	.	.	.	.	.	.	V	V	I	N	N	S	T	S	Y	A	G	S	Q	G	P	S	A	S	A	Y	V	T	Y	I	R	S	E	D	A	L	R	A	I	Q	C	V	N	N
Template Known Secondary structure			S	S									T	T	T								S	T	T	T	T	T	T	T	S					.	.	.	.	.	.	.	.							S	S			S	S	S											S	S												T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140									.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	I	R	G	Y	K	L	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V	D	G	R	T	L	K	A
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions