Job Description O43719 Confidence 99.61% Date Wed May 9 18:03:47 BST 2012 Rank 105 Aligned Residues 87 % Identity 24% Template d2cpha1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.
Predicted Secondary structure																																																		.	.																												.
Query SS confidence																																																		.	.																												.
Query Sequence		V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	.	.	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	.	D	E
Query Conservation																																																		.	.																												.
Alig confidence																																					.	.	.	.	.	.	.	.						.	.																												.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		P	K	K	Q	T	T	S	K	I	L	V	R	N	I	P	F	Q	A	N	Q	R	E	I	R	E	L	F	S	T	F	G	E	L	K	T	.	.	.	.	.	.	.	.	V	R	L	P	K	K	M	T	G	T	G	A	H	R	G	F	G	F	V	D	F	I	T	K	Q	D	A	K	K	A	F	N	A	L	C	H	S
Template Known Secondary structure				S	S									S			T	T												T	T	S					.	.	.	.	.	.	.	.								S	S	S		S	S		S							S	S													T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490									.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	L	Y	G	R	R	L	V	L	E	W	A	D	S	E	V	T
Template Known Secondary structure			B	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions