Job Description O43719 Confidence 99.54% Date Wed May 9 18:03:47 BST 2012 Rank 160 Aligned Residues 81 % Identity 16% Template d2cpda1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.				.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.				.	.	.	.	.
Template Sequence		S	S	V	K	I	L	Y	V	R	N	L	M	L	S	T	S	E	E	M	I	E	K	E	F	N	N	I	K	P	G	A	V	.	.	.	.	.	.	.	.	E	R	V	.	.	.	.	.	K	K	I	R	D	Y	A	F	V	H	F	S	N	R	E	D	A	V	E	A	M	K	A	L	N	G	K	V	L	D	G	S
Template Known Secondary structure		S									S			T	T												T	T	S	T	T			.	.	.	.	.	.	.	.				.	.	.	.	.				S	S							S	S												S	S				T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.				.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.									260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	H	V	E	V	A	K	F	Q	L	K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	E	V	T	L	A	K	P	V	D	K	D	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions