Job Description O43719 Confidence 99.51% Date Wed May 9 18:03:47 BST 2012 Rank 180 Aligned Residues 84 % Identity 20% Template d2adca2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L
Query Conservation
Alig confidence														.																												.	.	.	.	.	.	.	.							.	.	.
Template Conservation														.																												.	.	.	.	.	.	.	.							.	.	.
Template Sequence		K	N	F	Q	N	I	F	P	P	S	A	T	.	L	H	L	S	N	I	P	P	S	V	S	E	E	D	L	K	V	L	F	S	S	N	G	G	V	V	K	.	.	.	.	.	.	.	.	G	F	K	F	F	Q	.	.	.	K	D	R	K	M	A	L	I	Q	M	G	S	V	E	E	A	V	Q	A	L	I	D	L
Template Known Secondary structure			T	T	T	T				S		S		.								T	T												T	T	S					.	.	.	.	.	.	.	.						S	.	.	.	S	S	T	T							S	S
Template Predicted Secondary structure														.																												.	.	.	.	.	.	.	.							.	.	.
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.		.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.									.	.	.	.	.	.				.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		202	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		D	E	D	E	I	R	.	G	Y	K	L	H	V	E	V	A	K
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		H	N	H	D	L	G	E	N	H	H	L	R	V	S	F	S	K
Template Known Secondary structure		T	T		B	S	S	S	S		B							S
Template Predicted Secondary structure
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions