Job Description O43719 Confidence 99.63% Date Wed May 9 18:03:47 BST 2012 Rank 78 Aligned Residues 74 % Identity 24% Template d2adca1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		132	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		N	T	N	V	Y	V	S	G	L	P	P	D	.	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K
Query Conservation														.
Alig confidence														.																			.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.								.	.	.	.
Template Sequence		N	S	V	L	L	V	S	N	L	N	P	E	R	V	T	P	Q	S	L	F	I	L	F	G	V	Y	G	D	V	Q	R	.	.	.	.	.	.	.	.	V	K	I	L	F	N	K	.	.	.	.	K	E	N	A	L	V	Q	M	A	D	G	N	Q	A	Q	L	A	M	S	H	L	N	G	H	K	L	H	G	K	P
Template Known Secondary structure			S						S			T	T	T														T					.	.	.	.	.	.	.	.						T	T	.	.	.	.	S								S													T	T		B		S	S	S	B
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.								.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.									.	.	.	370	.	.	.					.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		211	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	I	T	L	S	K
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions