Job Description O43719 Confidence 99.66% Date Wed May 9 18:03:47 BST 2012 Rank 56 Aligned Residues 86 % Identity 26% Template d1x5ua1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I
Query Conservation																																																		.
Alig confidence																																				.	.	.	.	.	.	.	.							.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		E	R	N	Q	D	A	T	V	Y	V	G	G	L	D	E	K	V	S	E	P	L	L	W	E	L	F	L	Q	A	G	P	V	V	N	.	.	.	.	.	.	.	.	T	H	M	P	K	D	R	V	T	G	Q	H	Q	G	Y	G	F	V	E	F	L	S	E	E	D	A	D	Y	A	I	K	I	M	D	M	I	K	L
Template Known Secondary structure					T	T	T									T	T												T	T	S					.	.	.	.	.	.	.	.					B		S	S	S		S	B		S							S	S											S	S	S		B
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	K	P	I	R	V	N	K	A	S	A	H	N	K
Template Known Secondary structure		S	S		B						T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions