Job Description O43719 Confidence 99.55% Date Wed May 9 18:03:47 BST 2012 Rank 154 Aligned Residues 82 % Identity 21% Template d1x5ta1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V
Query Conservation																																											.
Alig confidence																													.	.	.	.	.	.	.								.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		I	F	I	G	N	L	D	P	E	I	D	E	K	L	L	Y	D	T	F	S	A	F	G	V	I	L	Q	.	.	.	.	.	.	.	T	P	K	I	M	R	D	P	D	T	G	N	S	K	G	Y	A	F	I	N	F	A	S	F	D	A	S	D	A	A	I	E	A	M	N	G	Q	Y	L	C	N	R	P	I	T	V
Template Known Secondary structure									T	T												T	T	S		B	S	S	.	.	.	.	.	.	.								T	T	T		S			S						B	S	S										T	T	T	T				T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		214	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	K	F	Q	L	K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	A	F	K	K	D	S	K	G
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions