Job Description O43719 Confidence 99.61% Date Wed May 9 18:03:47 BST 2012 Rank 111 Aligned Residues 81 % Identity 25% Template d1x5sa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R
Query Conservation																																																	.
Alig confidence																																			.	.	.	.	.	.	.	.							.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		A	S	D	E	G	K	L	F	V	G	G	L	S	F	D	T	N	E	Q	S	L	E	Q	V	F	S	K	Y	G	Q	I	S	E	.	.	.	.	.	.	.	.	V	V	V	V	K	D	R	E	T	Q	R	S	R	G	F	G	F	V	T	F	E	N	I	D	D	A	K	D	A	M	M	A	M	N	G	K	S	V	D
Template Known Secondary structure						S						S			T	T														S					.	.	.	.	.	.	.	.							S	S	S		S			S							S	S												T	T			T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		208	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	Q	I	R	V	D	Q	A	G
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions