Job Description O43719 Confidence 99.67% Date Wed May 9 18:03:47 BST 2012 Rank 48 Aligned Residues 95 % Identity 18% Template d1x5oa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	K	R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.
Template Sequence		L	K	A	S	G	V	Q	A	Q	M	A	K	Q	Q	E	Q	D	P	T	N	L	Y	I	S	N	L	P	L	S	M	D	E	Q	E	L	E	N	M	L	K	P	F	G	Q	V	I	S	.	.	.	.	.	.	.	.	T	R	I	L	R	D	S	S	G	T	S	R	G	V	G	F	A	R	M	E	S	T	E	K	C
Template Known Secondary structure					S								S						T	T						S			T	T									T	T	T	T	T	S					.	.	.	.	.	.	.	.							S	S	S											S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	V	I	G	H	F	N	G	K	F	I	K	T	P	P	G	V	S	A	P	T	E
Template Known Secondary structure									B	T							T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions