Job Description O43719 Confidence 99.65% Date Wed May 9 18:03:47 BST 2012 Rank 61 Aligned Residues 82 % Identity 17% Template d1x4ha1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																		.																												.	.	.	.
Query SS confidence																																																		.																												.	.	.	.
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	.	.	.	.
Query Conservation																																																		.																												.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.							.																												.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		D	V	T	E	G	K	T	V	F	I	R	N	L	S	F	D	S	E	E	E	A	L	G	E	V	L	Q	Q	F	G	D	L	K	Y	.	.	.	.	.	.	.	.	V	R	V	V	L	H	P	D	T	E	H	S	K	G	C	A	F	A	Q	F	M	T	Q	E	A	A	Q	K	C	L	A	A	A	S	L	E	A	E
Template Known Secondary structure													S			T	T												T	T	S					.	.	.	.	.	.	.	.					B		S	S	S			B		S							S	S													T	T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
				203	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		G	G	G	L	K	L	D	G	R	Q	L	K	V	D	L	A	V
Template Known Secondary structure		T					S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions