Job Description O43719 Confidence 99.55% Date Wed May 9 18:03:47 BST 2012 Rank 152 Aligned Residues 76 % Identity 28% Template d1x4ga1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.					.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.					.	.	.	.	.
Template Sequence		S	P	K	N	C	T	V	Y	C	G	G	I	A	S	G	L	T	D	Q	L	M	R	Q	T	F	S	P	F	G	Q	I	M	E	.	.	.	.	.	.	.	.	I	R	V	F	.	.	.	.	.	P	E	K	G	Y	S	F	V	R	F	S	T	H	E	S	A	A	H	A	I	V	S	V	N	G	T	T	I	E	G
Template Known Secondary structure			S	S										S	S															S					.	.	.	.	.	.	.	.					.	.	.	.	.	T	T	T	T							S	S												T	T				T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.					.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	V	K	C	Y	W	G	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions