Job Description O43719 Confidence 99.41% Date Wed May 9 18:03:47 BST 2012 Rank 202 Aligned Residues 90 % Identity 16% Template d1x4fa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		G	E	K	R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	.	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S
Query Conservation																														.
Alig confidence																														.																				.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		K	K	P	E	G	K	P	D	Q	K	F	D	Q	K	Q	E	L	G	R	V	I	H	L	S	N	L	P	H	S	G	Y	S	D	S	A	V	L	K	L	A	E	P	Y	G	K	I	K	N	.	.	.	.	.	.	.	.	Y	I	L	M	R	M	.	.	.	.	.	K	S	Q	A	F	I	E	M	E	T	R	E	D
Template Known Secondary structure				S											S	S										S				S	S			S					T	T	T	T	T	T	S			S		.	.	.	.	.	.	.	.					T	T	.	.	.	.	.	T	T							S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.
		194	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		V	E	L	A	L	K	L	L	.	.	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		A	M	A	M	V	D	H	C	L	K	K	A	L	W	F	Q	G	R	C	V	K	V	D	L	S	E
Template Known Secondary structure												S				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions