Job Description O43719 Confidence 99.55% Date Wed May 9 18:03:47 BST 2012 Rank 151 Aligned Residues 70 % Identity 21% Template d1x4ea1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H
Query Conservation																																											.
Alig confidence																													.	.	.	.	.	.	.	.							.
Template Conservation																													.	.	.	.	.	.	.	.
Template Sequence		L	Y	I	R	G	L	Q	P	G	T	T	D	Q	D	L	V	K	L	C	Q	P	Y	G	K	I	V	S	.	.	.	.	.	.	.	.	T	K	A	I	L	D	K	T	T	N	K	C	K	G	Y	G	F	V	D	F	D	S	P	S	A	A	Q	K	A	V	T	A	L	K	A	S	G	V	Q	A	Q	M	A	K
Template Known Secondary structure						S			T	T								T	T	S	T	T	T	S					.	.	.	.	.	.	.	.							S	S	S		S			S							S																T					S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions