Job Description O43719 Confidence 99.56% Date Wed May 9 18:03:47 BST 2012 Rank 148 Aligned Residues 74 % Identity 20% Template d1x0fa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H
Query Conservation																																												.
Alig confidence																														.	.	.	.	.	.	.	.							.																									.
Template Conservation																														.	.	.	.	.	.	.	.																																.
Template Sequence		K	I	F	V	G	G	L	S	P	D	T	P	E	E	K	I	R	E	Y	F	G	G	F	G	E	V	E	S	.	.	.	.	.	.	.	.	I	E	L	P	M	D	N	K	T	N	K	R	R	G	F	C	F	I	T	F	K	E	E	E	P	V	K	K	I	M	E	.	K	K	Y	H	N	V	G	L	S	K	C	E
Template Known Secondary structure							S			S	S														S					.	.	.	.	.	.	.	.							T	T	T			T	T								S	S	S							T	T	.		S	S			B	T	T	B
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																																.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.
		213	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions