Job Description O43719 Confidence 99.34% Date Wed May 9 18:03:47 BST 2012 Rank 209 Aligned Residues 72 % Identity 18% Template d1wwha1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.70

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	.
Query Conservation																																																																																	.
Alig confidence																	.																.	.	.	.	.	.	.	.							.	.	.	.	.																				.										.
Template Conservation																	.																.	.	.	.	.	.	.	.							.	.	.	.	.																				.
Template Sequence		D	D	T	W	V	T	V	F	G	F	P	Q	A	S	A	.	S	Y	I	L	L	Q	F	A	Q	Y	G	N	I	L	K	.	.	.	.	.	.	.	.	H	V	M	S	N	T	.	.	.	.	.	G	N	W	M	H	I	R	Y	Q	S	K	L	Q	A	R	K	A	L	S	.	K	D	G	R	I	F	G	E	S	I
Template Known Secondary structure		G	G	G									G	G	G		.									T	T	S					.	.	.	.	.	.	.	.					S	S	.	.	.	.	.	S	S							S	S									T	.	T	T	T				T	T	T
Template Predicted Secondary structure																	.																.	.	.	.	.	.	.	.							.	.	.	.	.																				.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200									.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.
		210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	I	G	V	K	P	C	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions