Job Description O43719 Confidence 99.53% Date Wed May 9 18:03:47 BST 2012 Rank 165 Aligned Residues 92 % Identity 21% Template d1whya_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L
Query Conservation
Alig confidence															.	.																															.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation															.	.																															.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		G	S	S	G	K	I	G	Y	G	K	A	N	P	.	.	T	T	R	L	W	V	G	G	L	G	P	N	T	S	L	A	A	L	A	R	E	F	D	R	F	G	S	I	R	T	.	.	.	.	.	.	.	.	I	D	H	V	K	G	.	.	.	.	.	D	S	F	A	Y	I	Q	Y	E	S	L	D	A	A	Q	A
Template Known Secondary structure															.	.		S									S	S												T	T	S					.	.	.	.	.	.	.	.					S	S	.	.	.	.	.	S								S	S
Template Predicted Secondary structure															.	.																															.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		197	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		A	L	K	L	L	D	E	D	E	I	R	G	.	.	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		A	C	A	K	M	R	G	F	P	L	G	G	P	D	R	R	L	R	V	D	F	A	K	S	G	P	S	S	G
Template Known Secondary structure							T	T		B		S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions