Job Description O43719 Confidence 99.69% Date Wed May 9 18:03:47 BST 2012 Rank 39 Aligned Residues 86 % Identity 20% Template d1whxa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.				.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.				.	.	.	.	.
Template Sequence		G	R	S	K	T	V	I	L	A	K	N	L	P	A	G	T	L	A	A	E	I	Q	E	T	F	S	R	F	G	S	L	G	R	.	.	.	.	.	.	.	.	V	L	L	.	.	.	.	.	P	E	G	G	I	T	A	I	V	E	F	L	E	P	L	E	A	R	K	A	F	R	H	L	A	Y	S	K	F	H	H
Template Known Secondary structure		S										S			T	T												T	T	S					.	.	.	.	.	.	.	.				.	.	.	.	.		S	S	S	S							S													T	T		B	S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.				.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250									.	.	.						.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	L	Y	L	E	W	A	P	I	G	V	F	G	A	A	P	Q	K
Template Known Secondary structure		S	B								T	T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions