Job Description O43719 Confidence 99.66% Date Wed May 9 18:03:47 BST 2012 Rank 52 Aligned Residues 95 % Identity 18% Template d1whwa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I
Query Conservation																																																		.
Alig confidence																																				.	.	.	.	.	.	.	.							.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		G	S	S	G	S	G	R	L	F	V	R	N	L	S	Y	T	S	S	E	E	D	L	E	K	L	F	S	A	Y	G	P	L	S	E	.	.	.	.	.	.	.	.	L	H	Y	P	I	D	S	L	T	K	K	P	K	G	F	A	F	V	T	F	M	F	P	E	H	A	V	K	A	Y	A	E	V	D	G	Q	V	F
Template Known Secondary structure					S											T	T												T	T	S					.	.	.	.	.	.	.	.							T	T	T					S							S	S											T	T	T			S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	R	M	L	H	V	L	P	S	T	I	K	K	E	A	S	Q	S	G	P	S	S	G
Template Known Secondary structure		S	S												S	T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions