Job Description O43719 Confidence 99.45% Date Wed May 9 18:03:47 BST 2012 Rank 198 Aligned Residues 85 % Identity 20% Template d1wf0a_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.							.	.	.	.																					.	.
Template Conservation																																			.	.	.	.	.	.	.	.							.	.	.	.																					.	.
Template Sequence		S	S	G	S	S	G	V	F	V	G	R	C	T	G	D	M	T	E	D	E	L	R	E	F	F	S	Q	Y	G	D	V	M	D	.	.	.	.	.	.	.	.	V	F	I	P	K	P	.	.	.	.	F	R	A	F	A	F	V	T	F	A	D	D	Q	I	A	Q	S	L	C	G	.	.	E	D	L	I	I	K	G
Template Known Secondary structure			S									S			S	S	S									S	T	T	T	S					.	.	.	.	.	.	.	.					S	S	.	.	.	.			S							S								T	T	T	.	.						T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.							.	.	.	.																					.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.									.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	V	H	I	S	N	A	E	P	K	H	N	S	N	S	G	P	S
Template Known Secondary structure																	S		S	S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions