Job Description O43719 Confidence 99.47% Date Wed May 9 18:03:47 BST 2012 Rank 191 Aligned Residues 89 % Identity 13% Template d1weya_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		132	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		N	T	N	V	Y	V	S	G	L	P	P	D	I	.	.	.	.	.	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																		.	.	.	.	.	.	.	.					.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.					.	.	.	.	.
Template Sequence		S	S	G	L	I	A	C	V	A	N	D	D	V	F	S	E	S	E	T	R	A	K	F	E	S	L	F	R	T	Y	D	K	D	T	T	.	.	.	.	.	.	.	.	F	Q	Y	F	.	.	.	.	.	K	S	F	K	R	V	R	I	N	F	S	N	P	L	S	A	A	D	A	R	L	R	L	H	K	T	E	F
Template Known Secondary structure												G	G	G	G	S	T	T	T											T	T		S	S			.	.	.	.	.	.	.	.					.	.	.	.	.	T	T	T	T							S	S	T	T								T	S	T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.					.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.									40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K	K	K	K	K	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	K	E	M	K	L	Y	F	A	Q	T	L	H	I	G	S	S	H	L	A	P	P	N	P	D	K
Template Known Secondary structure		T	T											S	S			S			S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions