Job Description O43719 Confidence 96.85% Date Wed May 9 18:03:47 BST 2012 Rank 220 Aligned Residues 79 % Identity 19% Template d1ufwa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	H	E	R	V	V	I	I	K	N	M	F	H	P	M	D	F	E	D	D	P	L	V	L	N	E	I	R	E	D	L	R	V	E	C	S	K	F	G	Q	I	R	K	L	L	L	F	D	R	H	P	D	G	V	A	S	V	S	F	R	D	P	E	E	A	D	Y	C	I	Q	T	L	D	G	R	W	F	G	G
Query Conservation
Alig confidence													.	.																																					.	.	.	.																			.
Template Conservation													.	.																																					.	.	.	.																			.
Template Sequence		G	P	L	D	A	T	V	V	V	N	L	.	.	Q	S	P	T	L	E	E	K	N	E	F	P	E	D	L	R	T	E	L	M	Q	T	L	G	S	Y	G	T	I	V	L	V	R	I	N	Q	.	.	.	.	G	Q	M	L	V	T	F	A	D	S	H	S	A	L	S	V	L	D	.	V	D	G	M	K	V	K	G
Template Known Secondary structure				T	T								.	.	S	S								S																	S			S						T	.	.	.	.	T							S		S									.	G	G	G	S			T	T
Template Predicted Secondary structure													.	.																																					.	.	.	.																			.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.
		340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	I	T	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	V	K	I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions