Job Description O43719 Confidence 99.63% Date Wed May 9 18:03:47 BST 2012 Rank 81 Aligned Residues 75 % Identity 20% Template d1uawa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L
Query Conservation																																													.
Alig confidence																															.	.	.	.	.	.	.	.							.																									.
Template Conservation																															.	.	.	.	.	.	.	.																																.
Template Sequence		C	K	M	F	I	G	G	L	S	W	Q	T	T	Q	E	G	L	R	E	Y	F	G	Q	F	G	E	V	K	E	.	.	.	.	.	.	.	.	C	L	V	M	R	D	P	L	T	K	R	S	R	G	F	G	F	V	T	F	M	D	Q	A	G	V	D	K	V	L	A	.	Q	S	R	H	E	L	D	S	K	T	I
Template Known Secondary structure								S			S	S			S								T	T	T	S					.	.	.	.	.	.	.	.									S	S	S		S	S									T	T								.	T	T	T				S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.																																.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90
		212	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	K	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions