Job Description O43719 Confidence 99.42% Date Wed May 9 18:03:47 BST 2012 Rank 200 Aligned Residues 81 % Identity 14% Template d1u2fa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V
Query Conservation
Alig confidence																														.	.																																					.
Template Conservation																														.	.																																					.
Template Sequence		R	L	Y	V	G	N	I	P	F	G	I	T	E	E	A	M	M	D	F	F	N	A	Q	M	R	L	G	G	.	.	L	T	Q	A	P	G	N	P	V	L	A	V	Q	I	N	Q	D	K	N	F	A	F	L	E	F	R	S	V	D	E	T	T	Q	A	M	A	.	F	D	G	I	I	F	Q	G	Q	S	L	K	I
Template Known Secondary structure							S			T	T			T	T											T	T	T	T	.	.	S			S	S	S		S								T	T	T	T							S	S		T	T	T	T	T	G	G	G	.	G	S	S			S	S	S	S
Template Predicted Secondary structure																														.	.																																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.
		214	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	P	H
Template Known Secondary structure		B		T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions