Job Description O43719 Confidence 99.40% Date Wed May 9 18:03:47 BST 2012 Rank 204 Aligned Residues 73 % Identity 21% Template d1sjqa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	.	.	L	D	E	D	E	I	R	G	Y
Query Conservation																																																																							.	.
Alig confidence																																.	.	.	.	.	.	.	.							.	.	.	.	.																					.	.
Template Conservation																																.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		S	R	V	I	H	I	R	K	L	P	I	D	V	T	E	G	E	V	I	S	L	G	L	P	F	G	K	V	T	N	.	.	.	.	.	.	.	.	L	L	M	L	K	G	.	.	.	.	.	K	N	Q	A	F	I	E	M	N	T	E	E	A	A	N	T	M	V	N	Y	Y	T	S	V	T	P	V	L	R	G	Q
Template Known Secondary structure									S			T	T	S																		.	.	.	.	.	.	.	.					T	T	.	.	.	.	.	T	T							S	S												T	T	S					T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	Y	I	Q	F	S	N
Template Known Secondary structure					B				S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions