Job Description O43719 Confidence 99.66% Date Wed May 9 18:03:47 BST 2012 Rank 51 Aligned Residues 86 % Identity 17% Template d1s79a_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.																															.
Template Conservation																																										.	.	.	.	.	.	.	.																															.
Template Sequence		G	R	W	I	L	K	N	D	V	K	N	R	S	V	Y	I	K	G	F	P	T	D	A	T	L	D	D	I	K	E	W	L	E	D	K	G	Q	V	L	N	.	.	.	.	.	.	.	.	I	Q	M	R	R	T	L	H	K	A	F	K	G	S	I	F	V	V	F	D	S	I	E	S	A	K	K	F	V	E	.	T
Template Known Secondary structure				S			S	S		S	G	G	G									T	T												T	S	S					.	.	.	.	.	.	.	.								T	T	S										S	S									T	.	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.																															.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	Q	K	Y	K	E	T	D	L	L	I	L	F	K
Template Known Secondary structure		S					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions