Job Description O43719 Confidence 49.63% Date Wed May 9 18:03:47 BST 2012 Rank 232 Aligned Residues 75 % Identity 19% Template d1pqsa_ SCOP info beta-Grasp (ubiquitin-like) CAD & PB1 domains PB1 domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	.	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L
Query Conservation																								.
Alig confidence																								.																		.							.	.	.	.	.
Template Conservation																																										.							.	.	.	.	.
Template Sequence		S	E	I	F	T	L	L	V	E	K	V	W	N	F	D	D	L	I	M	A	I	N	S	K	I	S	N	T	H	N	N	N	I	S	P	I	T	K	I	K	.	Y	Q	D	E	D	G	.	.	.	.	.	D	F	V	V	L	G	S	D	E	D	W	N	V	A	K	E	M	L	A	E	N	N	E	K	F	L	N	I
Template Known Secondary structure										T	T				S											T	T	T	T	T	S	S		S		S	T	T				.				T	T	T	.	.	.	.	.							S	T	T
Template Predicted Secondary structure																																										.							.	.	.	.	.
Template SS confidence
		778	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.		.	.	820	.	.	.						.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.
		212	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		852	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions