Job Description O43719 Confidence 99.56% Date Wed May 9 18:03:47 BST 2012 Rank 142 Aligned Residues 77 % Identity 29% Template d1p1ta_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L
Query Conservation																																													.
Alig confidence																															.	.	.	.	.	.	.	.							.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		R	S	V	F	V	G	N	I	P	Y	E	A	T	E	E	Q	L	K	D	I	F	S	E	V	G	P	V	V	S	.	.	.	.	.	.	.	.	F	R	L	V	Y	D	R	E	T	G	K	P	K	G	Y	G	F	C	E	Y	Q	D	Q	E	T	A	L	S	A	M	R	N	L	N	G	R	E	F	S	G	R	A	L
Template Known Secondary structure		S						S			T	T	S											T	T	S			S		.	.	.	.	.	.	.	.							T	T	T	T											S												S	S	S	B	S		S	S	S		B
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		212	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	D	N	A	A
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions