Job Description O43719 Confidence 96.69% Date Wed May 9 18:03:47 BST 2012 Rank 221 Aligned Residues 83 % Identity 14% Template d1owxa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		R	E	D	L	R	V	E	C	S	K	F	G	Q	I	R	K	L	L	L	F	D	R	H	P	D	G	V	A	S	V	S	F	R	D	P	E	E	A	D	Y	C	I	Q	T	.	.	.	L	D	G	R	W	F	G	G	R	Q	I	T	A	Q	A	W	D	G	T	T	D	Y	Q	V	E	E	T	S	R	E	R	E	E
Query Conservation																																														.	.	.
Alig confidence																					.	.																								.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	D	L	H	I	L	F	S	N	H	G	E	I	K	W	I	D	F	.	.	V	R	G	A	K	E	G	I	I	L	F	K	E	K	A	K	E	A	L	G	K	A	K	D	A	N	N	G	N	L	Q	L	R	N	K	E	V	T	W	E	V	L	.	.	.	.	.	.	.	.	.	.	E	G	E	V	E	K	E
Template Known Secondary structure									T		S	S									.	.		T	T		S							S	S												T	T	T	S		B		T	T	S	S	S							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.											.	.	.	310	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	G	W	E	A	F	L	N	A	P	E	A	N	R	G	L	R	R	S
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		A	.	.	.	L	K	K	I	I	E	D	Q	Q	E	S	L	N	K	W	K	S
Template Known Secondary structure			.	.	.
Template Predicted Secondary structure			.	.	.
Template SS confidence
		314				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions