Job Description O43719 Confidence 99.73% Date Wed May 9 18:03:47 BST 2012 Rank 30 Aligned Residues 80 % Identity 20% Template d1n54b_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.72

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G
Query Conservation																																																.
Alig confidence																																		.	.	.	.	.	.	.	.							.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		K	K	S	C	T	L	Y	V	G	N	L	S	F	Y	T	T	E	E	Q	I	Y	E	L	F	S	K	S	G	D	I	K	K	.	.	.	.	.	.	.	.	I	I	M	G	L	D	K	M	K	K	T	A	C	G	F	C	F	V	E	Y	Y	S	R	A	D	A	E	N	A	M	R	Y	I	N	G	T	R	L	D	D
Template Known Secondary structure		T	T											T	T											T	T	T	S					.	.	.	.	.	.	.	.							T	T	T		S										S	S											T	T	T	S			T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	I	R	T	D	W	D	A
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions