Job Description O43719 Confidence 99.62% Date Wed May 9 18:03:47 BST 2012 Rank 98 Aligned Residues 76 % Identity 17% Template d1l3ka2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 1.10

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K
Query Conservation																																														.
Alig confidence																																.	.	.	.	.	.	.	.							.																									.
Template Conservation																																.	.	.	.	.	.	.	.																																.
Template Sequence		V	K	K	I	F	V	G	G	I	K	E	D	T	E	E	H	H	L	R	D	Y	F	E	Q	Y	G	K	I	E	V	.	.	.	.	.	.	.	.	I	E	I	M	T	D	R	G	S	G	K	K	R	G	F	A	F	V	T	F	D	D	H	D	S	V	D	K	I	V	I	.	Q	K	Y	H	T	V	N	G	H	N
Template Known Secondary structure			S								T	T	T											T	T	T	S					.	.	.	.	.	.	.	.							T	T	T												S	S										.		S					T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.																																.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.
		211	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	E	V	R	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions