Job Description O43719 Confidence 99.67% Date Wed May 9 18:03:47 BST 2012 Rank 45 Aligned Residues 82 % Identity 20% Template d1l3ka1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 1.10

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I
Query Conservation																																																		.
Alig confidence																																				.	.	.	.	.	.	.	.							.																									.
Template Conservation																																				.	.	.	.	.	.	.	.																																.
Template Sequence		E	P	E	Q	L	R	K	L	F	I	G	G	L	S	F	E	T	T	D	E	S	L	R	S	H	F	E	Q	W	G	T	L	T	D	.	.	.	.	.	.	.	.	C	V	V	M	R	D	P	N	T	K	R	S	R	G	F	G	F	V	T	Y	A	T	V	E	E	V	D	A	A	M	N	.	A	R	P	H	K	V
Template Known Secondary structure				G	G	G	G						S			T	T											G	G	G	S					.	.	.	.	.	.	.	.							T	T	T												S	S										.	T		S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.																																.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	K	L	H	V	E	V	A	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	R	V	V	E	P	K	R	A	V	S
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions