Job Description O43719 Confidence 99.66% Date Wed May 9 18:03:47 BST 2012 Rank 54 Aligned Residues 85 % Identity 25% Template d1jmta_ SCOP info Ferredoxin-like RNA-binding domain, RBD Splicing factor U2AF subunits Resolution 2.20

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		263	.	.	.	.	.	.	270	.	.	.										.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure													.	.	.	.	.	.	.	.	.																																						.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.																																						.	.	.
Query Sequence		E	R	V	V	I	I	K	N	M	F	H	.	.	.	.	.	.	.	.	.	P	M	D	F	E	D	D	P	L	V	L	N	E	I	R	E	D	L	R	V	E	C	S	K	F	G	Q	I	R	K	L	L	L	F	D	R	H	.	.	.	P	D	G	V	A	S	V	S	F	R	D	P	E	E	A	D	Y	C	I	Q
Query Conservation													.	.	.	.	.	.	.	.	.																																						.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																																						.	.	.
Template Conservation
Template Sequence		S	Q	T	I	A	L	L	N	I	Y	R	N	P	Q	D	G	L	R	S	A	V	S	D	V	E	M	Q	E	H	Y	D	E	F	F	E	E	V	F	T	E	M	E	E	K	Y	G	E	V	E	E	M	N	V	C	D	N	L	G	D	H	L	V	G	N	V	Y	V	K	F	R	R	E	E	D	A	E	K	A	V	I
Template Known Secondary structure																																														T											S	S	S	S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	G	R	W	F	G	G	R	Q	I	T	A	Q	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	N	N	R	W	F	N	G	Q	P	I	H	A	E	L	S
Template Known Secondary structure				T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions