Job Description O43719 Confidence 99.62% Date Wed May 9 18:03:47 BST 2012 Rank 94 Aligned Residues 74 % Identity 27% Template d1hd0a_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H
Query Conservation																																												.
Alig confidence																														.	.	.	.	.	.	.	.							.																									.
Template Conservation																														.	.	.	.	.	.	.	.																																.
Template Sequence		K	M	F	I	G	G	L	S	W	D	T	T	K	K	D	L	K	D	Y	F	S	K	F	G	E	V	V	D	.	.	.	.	.	.	.	.	C	T	L	K	L	D	P	I	T	G	R	S	R	G	F	G	F	V	L	F	K	E	S	E	S	V	D	K	V	M	D	.	Q	K	E	H	K	L	N	G	K	V	I	D
Template Known Secondary structure										T	T												T	T	S					.	.	.	.	.	.	.	.						B	T	T	T	T	B			S							S	S										.	T					B	T	T	B
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																																.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.
		213	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	R	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions