Job Description O43719 Confidence 99.67% Date Wed May 9 18:03:47 BST 2012 Rank 50 Aligned Residues 83 % Identity 34% Template d1fnxh2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.																																		.
Query SS confidence																																															.																																		.
Query Sequence		R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	.
Query Conservation																																															.																																		.
Alig confidence																																	.	.	.	.	.	.	.	.							.																																		.
Template Conservation																																	.	.	.	.	.	.	.	.
Template Sequence		R	D	A	N	L	Y	V	S	G	L	P	K	T	M	S	Q	K	E	M	E	Q	L	F	S	Q	Y	G	R	I	I	T	.	.	.	.	.	.	.	.	S	R	I	L	L	D	Q	A	T	G	V	S	R	G	V	G	F	I	R	F	D	K	R	I	E	A	E	E	A	I	K	G	L	N	G	Q	K	P	L	G	A
Template Known Secondary structure		S											T	T												T	T	S					.	.	.	.	.	.	.	.							S	S	S	S											S											T	T						S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
			209	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Y	K	L	H	V	E	V	A	K	F	Q	L	K
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	E	P	I	T	V	K	F	A	N	N	P	S	Q
Template Known Secondary structure		S		S									S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions