Job Description O43719 Confidence 99.52% Date Wed May 9 18:03:47 BST 2012 Rank 170 Aligned Residues 78 % Identity 19% Template d1fjeb2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	R	A	A	R	T	L	L	A	K	N	L	S	F	N	I	T	E	D	E	L	K	E	V	F	E	D	A	L	E	I	R	.	.	.	.	.	.	.	.	.	.	.	.	L	V	S	Q	D	G	K	S	K	G	I	A	Y	I	E	F	K	S	E	A	D	A	E	K	N	L	E	E	K	Q	G	A	E	I	D
Template Known Secondary structure		T	T	G	G	G	G						S			S	S											T	T		S				.	.	.	.	.	.	.	.	.	.	.	.				S	S	S	S			S							S	S												T					T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.													.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		208	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	S	V	S	L	Y	Y	T	G
Template Known Secondary structure		T									S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions