Job Description O43719 Confidence 99.55% Date Wed May 9 18:03:47 BST 2012 Rank 155 Aligned Residues 95 % Identity 17% Template d1fjca_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.			.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.			.	.	.	.
Template Sequence		H	M	L	E	D	P	C	T	S	K	K	V	R	A	A	R	T	L	L	A	K	N	L	S	F	N	I	T	E	D	E	L	K	E	V	F	E	D	A	L	E	I	R	L	.	.	.	.	.	.	.	.	V	S	.	.	.	.	Q	D	G	K	S	K	G	I	A	Y	I	E	F	K	S	E	A	D	A	E	K	N
Template Known Secondary structure				S	S		T	T	T	T	S	T	T	T	G	G	G						S			S	S												S							.	.	.	.	.	.	.	.			.	.	.	.		T	T											S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.			.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	K	Q	G	A	E	I	D	G	R	S	V	S	L	Y	Y	T	G	E	K	G	G	T	R	G
Template Known Secondary structure					T	T					T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions