Job Description O43719 Confidence 99.63% Date Wed May 9 18:03:47 BST 2012 Rank 79 Aligned Residues 76 % Identity 22% Template d1cvja1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.60

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H
Query Conservation																																												.
Alig confidence																														.	.	.	.	.	.	.	.							.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		S	L	Y	V	G	D	L	H	P	D	V	T	E	A	M	L	Y	E	K	F	S	P	A	G	P	I	L	S	.	.	.	.	.	.	.	.	I	R	V	C	R	D	M	I	T	R	R	S	L	G	Y	A	Y	V	N	F	Q	Q	P	A	D	A	E	R	A	L	D	T	M	N	F	D	V	I	K	G	K	P	V	R
Template Known Secondary structure							S			T	T											G	G	G	S					.	.	.	.	.	.	.	.							T	T	T												S	S									T	T	S	T	T				T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.									40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		213	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	W	S	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions