Job Description O43719 Confidence 99.63% Date Wed May 9 18:03:47 BST 2012 Rank 87 Aligned Residues 81 % Identity 35% Template d1b7fa2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.60

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I
Query Conservation																																																		.
Alig confidence																																				.	.	.	.	.	.	.	.							.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		E	S	I	K	D	T	N	L	Y	V	T	N	L	P	R	T	I	T	D	D	Q	L	D	T	I	F	G	K	Y	G	S	I	V	Q	.	.	.	.	.	.	.	.	K	N	I	L	R	D	K	L	T	G	R	P	R	G	V	A	F	V	R	Y	N	K	R	E	E	A	Q	E	A	I	S	A	L	N	N	V	I	P
Template Known Secondary structure			T	T	T	T							S			T	T											T	S	S	S					.	.	.	.	.	.	.	.							T	T	T												S	S												T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.									240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		207	.			.	210	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		R	G	.	.	Y	K	L	H	V	E	V	A
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		E	G	G	S	Q	P	L	S	V	R	L	A
Template Known Secondary structure		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions