Job Description O43719 Confidence 99.59% Date Wed May 9 18:03:47 BST 2012 Rank 120 Aligned Residues 79 % Identity 22% Template c4a8xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna-binding protein with serine-rich domain 1; PDBTitle: structure of the core asap complex Resolution 1.90 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G
Query Conservation																																															.	.
Alig confidence																																	.	.	.	.	.	.	.	.							.	.
Template Conservation																																	.	.	.	.	.	.	.	.
Template Sequence		K	P	T	K	V	H	I	G	R	L	T	R	N	V	T	K	D	H	I	M	E	I	F	S	T	Y	G	K	I	K	M	.	.	.	.	.	.	.	.	I	D	M	P	V	E	R	M	H	P	H	L	S	K	G	Y	A	Y	V	E	F	E	N	P	D	E	A	E	K	A	L	K	H	M	D	G	G	Q	I	D	G
Template Known Secondary structure													T	T												T	T	S					.	.	.	.	.	.	.	.							T	T							S							S	S												T	T				T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		209	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	I	T	A	T	A	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions