Job Description O43719 Confidence 99.40% Date Wed May 9 18:03:47 BST 2012 Rank 203 Aligned Residues 79 % Identity 18% Template c3r27A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l; PDBTitle: crystal structure of the first rrm domain of heterogeneous nuclear2 ribonucleoprotein l (hnrnp l) Resolution 2.04 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	.	.	D	E	D	E
Query Conservation																																																																												.	.
Alig confidence																																				.	.	.	.	.	.	.	.							.	.	.	.	.																						.	.
Template Conservation																																				.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		K	T	P	A	S	P	V	V	H	I	R	G	L	I	D	G	V	V	E	A	D	L	V	E	A	L	Q	E	F	G	P	I	S	Y	.	.	.	.	.	.	.	.	V	V	V	M	P	K	.	.	.	.	.	K	R	Q	A	L	V	E	F	E	D	V	L	G	A	C	N	A	V	N	Y	A	A	D	N	Q	I	Y
Template Known Secondary structure							S						S			T	T											G	G	G	S					.	.	.	.	.	.	.	.					T	T	.	.	.	.	.	T	T							S	S														S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130									.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	G	Y	K	L	H	V	E	V	A	K	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	G	H	P	A	F	V	N	Y	S	T	S	Q
Template Known Secondary structure			T	T									S		S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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