Job Description O43719 Confidence 95.09% Date Wed May 9 18:03:47 BST 2012 Rank 225 Aligned Residues 47 % Identity 19% Template c3pq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:poly(a) rna polymerase; PDBTitle: crystal structure of human mitochondrial poly(a) polymerase (papd1) Resolution 3.10 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E
Query Conservation
Alig confidence													.	.	.	.															.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation													.	.	.	.															.	.	.	.	.	.	.	.									.	.	.	.
Template Sequence		R	T	V	L	I	H	C	P	E	K	N	.	.	.	.	K	F	L	K	Y	L	S	Q	F	G	P	I	N	N	.	.	.	.	.	.	.	.	H	F	F	Y	E	S	F	G	.	.	.	.	L	Y	A	V	V	E	F	C	S	I	G	S	L	Q
Template Known Secondary structure		T											.	.	.	.							G	G	G	S					.	.	.	.	.	.	.	.						S	S	S	.	.	.	.
Template Predicted Secondary structure													.	.	.	.															.	.	.	.	.	.	.	.									.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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