Job Description O43719 Confidence 96.14% Date Wed May 9 18:03:47 BST 2012 Rank 224 Aligned Residues 75 % Identity 24% Template c3p3dA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nucleoporin 53; PDBTitle: crystal structure of the nup53 rrm domain from pichia guilliermondii Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	.	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H
Query Conservation																															.
Alig confidence													.																		.																.	.	.	.	.																	.
Template Conservation													.																																		.	.	.	.	.																	.
Template Sequence		A	I	L	V	F	G	Y	P	E	T	M	.	A	N	Q	V	I	A	Y	F	Q	E	F	G	T	I	L	E	D	F	E	V	L	R	K	P	F	V	P	I	F	S	G	N	S	.	.	.	.	.	W	T	K	I	T	Y	D	N	P	A	S	A	V	D	A	L	.	L	E	N	G	A	V	F	N	G	V	L	L	G
Template Known Secondary structure										G	G	G	.									G	G	G	S		B		S			G	G	G											T	T	.	.	.	.	.						B	S	S									.	T	T	T	T				T	T
Template Predicted Secondary structure													.																																		.	.	.	.	.																	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.
		213	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		351	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions