Job Description O43719 Confidence 99.51% Date Wed May 9 18:03:47 BST 2012 Rank 181 Aligned Residues 70 % Identity 30% Template c3n9uI_ PDB info PDB header:splicing Chain: I: PDB Molecule:cleavage and polyadenylation specificity factor subunit 7; PDBTitle: crystal structure of the complex between the 25 kda subunit and the 592 kda subunit (rrm domain) of human cleavage factor im Resolution 1.92 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																										.	.																		.
Query SS confidence																										.	.																		.
Query Sequence		V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	.	.	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L
Query Conservation																										.	.																		.
Alig confidence																										.	.				.	.	.	.	.	.	.	.							.														.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		V	Y	V	G	S	F	S	W	W	T	T	D	Q	Q	L	I	Q	V	I	R	S	I	G	V	Y	D	V	V	E	.	.	.	.	.	.	.	.	L	K	F	A	E	N	R	A	N	G	Q	S	K	G	Y	A	E	V	V	V	.	.	.	.	.	V	H	K	L	L	E	L	L	P	G	K	V	L	N	G	E	K	V
Template Known Secondary structure									T	T												T	T	T							.	.	.	.	.	.	.	.							T	T	T												.	.	.	.	.								S	T	T				T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.									.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		212	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	R	P	A	T
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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