Job Description O43719 Confidence 99.94% Date Wed May 9 18:03:47 BST 2012 Rank 5 Aligned Residues 192 % Identity 20% Template c3h2uD_ PDB info PDB header:cell adhesion Chain: D: PDB Molecule:raver-1; PDBTitle: human raver1 rrm1, rrm2, and rrm3 domains in complex with2 human vinculin tail domain vt Resolution 2.75 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.				.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.				.	.	.	.	.
Template Sequence		R	N	R	R	K	I	L	I	R	G	L	P	G	D	V	T	N	Q	E	V	H	D	L	L	S	D	Y	E	L	K	Y	.	.	.	.	.	.	.	.	.	C	F	V	.	.	.	.	.	D	K	Y	K	G	T	A	F	V	T	L	L	N	G	E	Q	A	E	A	A	I	N	A	F	H	Q	S	R	L	R	E	R
Template Known Secondary structure														T	T										T	T	T	S			S		.	.	.	.	.	.	.	.	.				.	.	.	.	.		T	T	T	T							S	S												T	T				T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.				.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.										.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	H	V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K	K	K	K	K	C	K	D	Y	K	K	K	L	S	M	Q	Q	K	Q	L	D	W	R	P	E	R	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	S	V	Q	L	Q	P	T	D	A	L	L	C	V	A	N	L	P	P	S	L	T	Q	Q	Q	F	E	E	L	V	R	P	F	G	S	L	E	R	C	F	L	V	Y	S	E	R	T	G	Q	S	K	G	Y	G	F	A	E	Y	M	K	K	D	S	A	A	R	A	K	S	D	L	L	G	K	P	L	G	P	R
Template Known Secondary structure												S						S			T	T											G	G	G	S											T	T	T												S	S												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
														256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.				.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	P	S	R	M	R	H	E	R	V	V	I	I	K	N	M	F	H	P	M	D	F	E	D	D	P	L	V	L	N	E	I	R	E	D	L	R	V	E	C	S	K	F	G	Q	I	R	K	L	L	L	F	.	.	.	D	R	H	P	D	G	V	A	S	V	S	F	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	Y	V	H	W	T	D	A	G	Q	L	T	P	A	L	L	H	S	R	C	L	C	V	D	R	L	P	P	G	F	N	D	.	.	.	.	.	.	.	.	.	.	.	V	D	A	L	C	R	A	L	S	A	V	H	S	P	T	F	C	Q	L	A	C	G	Q	D	G	Q	L	K	G	F	A	V	L	E	Y	E
Template Known Secondary structure										S									S								S			T	T				.	.	.	.	.	.	.	.	.	.	.	S							T	T	S	S	S			S								T	T	S											S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.												.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	E	E	A	D	Y	C	I	Q	T	L	D	G	R	W	F	G	G	R	Q	I	T	A	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	E	M	A	E	E	A	Q	Q	Q	A	D	G	L	S	L	G	G	S	H	L	R	V	S	F
Template Known Secondary structure		S												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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