Job Description O43719 Confidence 90.84% Date Wed May 9 18:03:47 BST 2012 Rank 229 Aligned Residues 54 % Identity 24% Template c3ctrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:poly(a)-specific ribonuclease parn; PDBTitle: crystal structure of the rrm-domain of the poly(a)-specific2 ribonuclease parn bound to m7gtp Resolution 2.10 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Sequence		H	V	L	H	V	T	F	P	K	E	W	K	T	S	D	L	Y	Q	L	F	S	A	F	G	N	I	Q	.	.	.	.	.	.	.	.	.	I	S	W	I	D	D	T	S	.	.	.	.	.	.	A	F	V	S	L	S	Q	P	E	Q	V	K	I	A	V	N	T	S	K
Template Known Secondary structure										T	T										T	T	T	S					.	.	.	.	.	.	.	.	.						T	T		.	.	.	.	.	.																			T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template SS confidence
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.										.	.	.	.	.	.	.	480							.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions