Job Description O43719 Confidence 99.55% Date Wed May 9 18:03:47 BST 2012 Rank 157 Aligned Residues 84 % Identity 23% Template c2ytcA_ PDB info PDB header:transcription Chain: A: PDB Molecule:pre-mrna-splicing factor rbm22; PDBTitle: solution structure of rna binding domain in pre-mrna-2 splicing factor rbm22 Resolution UNK

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		G	S	S	G	S	S	G	E	D	K	T	I	T	T	L	Y	V	G	G	L	G	D	T	I	T	E	T	D	L	R	N	H	F	Y	Q	F	G	E	I	R	T	.	.	.	.	.	.	.	.	I	T	V	V	Q	R	.	.	.	.	.	Q	Q	C	A	F	I	Q	F	A	T	R	Q	A	A	E	V	A	A	E	K
Template Known Secondary structure									S		S	S										T	T	T	S											T	T	S					.	.	.	.	.	.	.	.					G	G	.	.	.	.	.	G	T							S	S										T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.									.	.	270	.	.	.						.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		201		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		S	F	N	K	L	I	V	N	G	R	R	L	N	V	K	W	G	R
Template Known Secondary structure		T	T	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions