Job Description O43719 Confidence 99.62% Date Wed May 9 18:03:47 BST 2012 Rank 90 Aligned Residues 84 % Identity 21% Template c2x1aA_ PDB info PDB header:transcription/rna Chain: A: PDB Molecule:mrna 3'-end-processing protein rna15; PDBTitle: structure of rna15 rrm with rna bound (g) Resolution 2.05 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K
Query Conservation																																														.
Alig confidence																																.	.	.	.	.	.	.	.							.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		S	R	V	V	Y	L	G	S	I	P	Y	D	Q	T	E	E	Q	I	L	D	L	C	S	N	V	G	P	V	I	N	.	.	.	.	.	.	.	.	L	K	M	M	F	D	P	Q	T	G	R	S	K	G	Y	A	F	I	E	F	R	D	L	E	S	S	A	S	A	V	R	N	L	N	G	Y	Q	L	G	S	R	F
Template Known Secondary structure			S						S			T	T														S					.	.	.	.	.	.	.	.							T	T	T	T											S	S												T	T				T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	E	V	A	K	F	Q	L	K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	C	G	Y	S	S	N	S	D	I	S	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions