Job Description O43719 Confidence 99.57% Date Wed May 9 18:03:47 BST 2012 Rank 133 Aligned Residues 90 % Identity 18% Template c2lmiA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:g-rich sequence factor 1; PDBTitle: nmr structure of the protein bc040485 from homo sapiens Resolution UNK

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L
Query Conservation
Alig confidence																																													.	.	.	.	.																															.
Template Conservation																																													.	.	.	.	.																															.
Template Sequence		G	S	K	L	E	E	E	V	D	D	V	F	L	I	R	A	Q	G	L	P	W	S	C	T	M	E	D	V	L	N	F	F	S	D	C	R	I	R	N	G	E	N	G	.	.	.	.	.	I	H	F	L	L	N	R	D	G	K	R	R	G	D	A	L	I	E	M	E	S	E	Q	D	V	Q	K	A	L	E	.	K
Template Known Secondary structure										S	S											S	S			S							T	T	T	S		B	T	T	T	T	T	T	.	.	.	.	.							T	T	S	T	T		S						B	S	S									T	.	T
Template Predicted Secondary structure																																													.	.	.	.	.																															.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	M	Y	M	G	Q	R	Y	V	E	V	Y	E	I	N
Template Known Secondary structure		T	T			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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