Job Description O43719 Confidence 99.56% Date Wed May 9 18:03:47 BST 2012 Rank 144 Aligned Residues 76 % Identity 28% Template c2la4A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: nmr structure of the c-terminal rrm domain of poly(u) binding 1 Resolution UNK

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		P	P	R	V	T	T	A	Y	I	G	N	I	P	H	F	A	T	E	A	D	L	I	P	L	F	Q	N	F	G	F	I	L	D	.	.	.	.	.	.	.	.	F	K	H	Y	P	E	.	.	.	.	.	K	G	C	C	F	I	K	Y	D	T	H	E	Q	A	A	V	C	I	V	A	L	A	N	F	P	F	Q	G
Template Known Secondary structure			S	S								S			T	T												T	T	S			S		.	.	.	.	.	.	.	.					T	T	.	.	.	.	.	T	T							S	S												T	T				T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.									370	.	.	.	.	.						.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		209	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	L	R	T	G	W	G	K
Template Known Secondary structure								B
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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